CDS

Accession Number TCMCG005C25420
gbkey CDS
Protein Id XP_020273103.1
Location complement(join(115359094..115359168,115361101..115361172,115361262..115361324,115361520..115361625,115361829..115361923,115362355..115362384,115366469..115366540,115366905..115366964,115367030..115367076,115368271..115368335,115368785..115368873,115368963..115369001,115369126..115369185,115372075..115372147,115373759..115373925,115379947..115380027,115381734..115381865,115381975..115382072,115383515..115383635,115385968..115386112,115387533..115387716,115390724..115390818,115394091..115394202,115394280..115394384,115394474..115394501))
Gene LOC109848148
GeneID 109848148
Organism Asparagus officinalis

Protein

Length 737aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA376608;
db_source XM_020417514.1
Definition U3 small nucleolar RNA-associated protein 25 isoform X1

EGGNOG-MAPPER Annotation

COG_category K
Description Utp25, U3 small nucleolar RNA-associated SSU processome protein 25
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14774        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000462        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0019843        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0030490        [VIEW IN EMBL-EBI]
GO:0030515        [VIEW IN EMBL-EBI]
GO:0030684        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032040        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034511        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042274        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGTAAACAACTTGCAAAGAAAAGAGCAGTAAAGAGGTCCAACCCCCTGGCCCAGGTTGAAGACACAAAGAAGAGATTGAGGAAGAAGAGCAATGATTTAGAAATTCAGACTGCACTCCCAAGTTCTGCAGGTAGCCTTTCTTCAGACGAAGAGGATGTGCACAATGAACAAGTAGCATTTGACTGCTTGTTAAACCAGTTGGGATCACGTAGTGACAAGATGACTAGCTTGTATAAGAGGAGACGAAGGGAGCAAAAAGGCTTGGAGGAAGATGAAGAAGATGAAGAAGATGGTGATGAATATTCTATGTTTGACGGGGAAAATGGTGGTGAGGAAGGCTCGGACAGTGAACCTATGGATGATTCTGAAGGTGAATATCTCAGACGATGCGGGCATTCTCAAATTATGAAGCAGAGAGAGGAACATGAAACTGGAGACAAAGATGCTGCCTCTAGCGGGGATGATACAAATGGTTCTGAAAATGATAGCCATACAAATGTTGATGAAATAGCTAGCATATGCTCTTTCCATCGTCACCTGGAGGACATTCTAACAGATGAACATGCTGATGAGTTGACAAAATCTATATGGAAATATAAGTGGGAAATGCCTGCAACTGGCAGATCAATGTCGAAGTGGATGGGAACAGGCGAACGCTTGTCAATGGAAGTTAGCAGTGACTCGGTGTATGGGGTCAAGCAAAAACTCTACAAGCATTGGCTAGACATCTTCAAGGCATCTGCTTTTGCTGATTTAGATCCTCAGTTGAGATTCTTCTTTTCACTTTGCCATAGCTATCGTGATATAATGCATTGTAACAAGAAGCCATTTTATCTTAAAGGTGAGGAGGATTCAGTTATCATGGACGCGTACCTTATGCATGCTTTAGATCATGTTTTTAAGACAAGGGATCTTGTGAGCAAGAATAATGCAAAAATTAGCACAGATCCAGATGGTAAAATGGAGGAGATTCTTAGTGCAAGCAATTTCCTTGATCATGGTTTTACACGTCCCAAGGTGATGTTTTTGCTGCCACTTGGAAGCATCGCATTACATGTTGTCAAAAGGCTAATTCAACTTATTCCAACATCAAATAAAACCAATATAGAGCACATGGATCGCTTTTTGAAGGAGTTTGGAACTGATGACACTGAAGAAGAAGACAAGGATTCAAAAACTAAAAAACCTGTGAAGCCTAAAGACTTTCAACGTCTGTTTGGTGGAAACAACAATGATCACTTTATGATAGGCATAAAGATAACGAAGAGAAGCATAAAATTCTACCATGATTTTTATTCATCAGATATCATTATAGCATCACCTCTTGGATTGATCGCTAAAATTGGAGAAGCAGAGGCAGAAAAGGCAAAGGATGTTGATTATCTATCGTCAATAGAGCTTTTGATCATTGATCATGCAGACGTGATAGCAATGCAGAATTGGTCCCATTTGAATACTGTAGTTGAGCAACTGAATCATATGCCTTCTAAACAACATCAAACTGATGTCATGCGCATTAGGCAGTGGTATCTAAATGGGCATGCACGCTTTTATCGACAAACAATATTGTTAGGTGCTTTTCTTAACCCAGATATGAATGCACTTTTCAATCGGTCCTGTATGAATTATGAGGGGAAGGTTAAATTGCTGAGCGAGTATAAAGGTGTCCTTCCTAAAGTGCTACCTCAAGTGAAGCAGGTGTATCAGCGTTTTGATGCTTCTTCAATTGTTGATGTTGATGATGCACGCCTTGATTACTTTTCTAATAAGGTGTTTCCTAAAATAAAGGATTCAGTGGAGGGAGGCATCATGTTATTTGTCAGTTCCTATTTTGAATACGTGAGAGTGCGGAATTTCTTAACATCTCAGAATGCTTCCTTCTGCTTATTTGGAGATTATGCAGAGCCACGTGATATATCTCGTGCACGTGTGTGGTTTTTTGAGGGCAAGCGGAAGATCATGCTTTACACCGAAAGAGCTCATTTTTATCGCAGATACAAGATTCGTGGAATAAAGAATTTATTTATCTACTCTCTACCTGAAAGAAAAGAATTCTACCCTGAGATAATTAATATGCTAGAAGGATCAAACAACTTGATGTGCAATGTGCTCTTTTCACGCTTTGATCATCTTCGGCTGGAGAGAGTCGTTGGGACTGGAGCTGCCAAGAGGATGGTGTCCTCTGATAAGAAGATCTTTGTTTTTGCCTGA
Protein:  
MGKQLAKKRAVKRSNPLAQVEDTKKRLRKKSNDLEIQTALPSSAGSLSSDEEDVHNEQVAFDCLLNQLGSRSDKMTSLYKRRRREQKGLEEDEEDEEDGDEYSMFDGENGGEEGSDSEPMDDSEGEYLRRCGHSQIMKQREEHETGDKDAASSGDDTNGSENDSHTNVDEIASICSFHRHLEDILTDEHADELTKSIWKYKWEMPATGRSMSKWMGTGERLSMEVSSDSVYGVKQKLYKHWLDIFKASAFADLDPQLRFFFSLCHSYRDIMHCNKKPFYLKGEEDSVIMDAYLMHALDHVFKTRDLVSKNNAKISTDPDGKMEEILSASNFLDHGFTRPKVMFLLPLGSIALHVVKRLIQLIPTSNKTNIEHMDRFLKEFGTDDTEEEDKDSKTKKPVKPKDFQRLFGGNNNDHFMIGIKITKRSIKFYHDFYSSDIIIASPLGLIAKIGEAEAEKAKDVDYLSSIELLIIDHADVIAMQNWSHLNTVVEQLNHMPSKQHQTDVMRIRQWYLNGHARFYRQTILLGAFLNPDMNALFNRSCMNYEGKVKLLSEYKGVLPKVLPQVKQVYQRFDASSIVDVDDARLDYFSNKVFPKIKDSVEGGIMLFVSSYFEYVRVRNFLTSQNASFCLFGDYAEPRDISRARVWFFEGKRKIMLYTERAHFYRRYKIRGIKNLFIYSLPERKEFYPEIINMLEGSNNLMCNVLFSRFDHLRLERVVGTGAAKRMVSSDKKIFVFA